API v1 (Expanded)
My API v1
Scroll down for code samples, example requests and responses. Select a language for code samples from the tabs above or the mobile navigation menu.
Authentication
- API Key (Bearer)
- Parameter Name: Authorization, in: header. JWT Authorization header using the Bearer scheme. \r\n\r\n Enter 'Bearer' [space] and then your token in the text input below. \r\n\r\nExample: 'Bearer 12345abcdef'
Account
GET /api/Account
GET /api/Account
Example responses
200 Response
{"id":"string","displayName":"string","email":"string","roles":["string"],"bio":"string","org":{"id":"497f6eca-6276-4993-bfeb-53cbbbba6f08","name":"string","alias":"string","address":"string"},"lock":true,"archived":"2019-08-24T14:15:22Z"}
{
"id": "string",
"displayName": "string",
"email": "string",
"roles": [
"string"
],
"bio": "string",
"org": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"name": "string",
"alias": "string",
"address": "string"
},
"lock": true,
"archived": "2019-08-24T14:15:22Z"
}
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | UserDto |
Accounts
GET /api/elevated/Accounts/roles
GET /api/elevated/Accounts/roles
Example responses
200 Response
[{"id":"string","name":"string","normalizedName":"string","concurrencyStamp":"string","description":"string"}]
[
{
"id": "string",
"name": "string",
"normalizedName": "string",
"concurrencyStamp": "string",
"description": "string"
}
]
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | Inline |
Response Schema
Status Code 200
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
anonymous | [AppRole] | false | none | none |
POST /api/elevated/Accounts/roles
POST /api/elevated/Accounts/roles
Body parameter
{
"id": "string",
"name": "string",
"normalizedName": "string",
"concurrencyStamp": "string",
"description": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
body | body | AppRole | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/elevated/Accounts/orgs
GET /api/elevated/Accounts/orgs
Example responses
200 Response
[{"id":"497f6eca-6276-4993-bfeb-53cbbbba6f08","name":"string","alias":"string","address":"string"}]
[
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"name": "string",
"alias": "string",
"address": "string"
}
]
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | Inline |
Response Schema
Status Code 200
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
anonymous | [AppOrg] | false | none | none |
POST /api/elevated/Accounts/orgs
POST /api/elevated/Accounts/orgs
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"name": "string",
"alias": "string",
"address": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
body | body | AppOrg | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Accounts/orgs/{id}
POST /api/elevated/Accounts/orgs/{id}
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"name": "string",
"alias": "string",
"address": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
body | body | AppOrg | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/elevated/Accounts
GET /api/elevated/Accounts
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Accounts
POST /api/elevated/Accounts
Body parameter
{
"email": "user@example.com",
"displayName": "string",
"orgId": "25b2c2d5-a7fc-47d0-89e4-8709a1560bfa",
"bio": "string",
"roles": [
"string"
],
"lock": true
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
body | body | RegisterDto | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/elevated/Accounts/{email}
GET /api/elevated/Accounts/{email}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
path | string | true | none |
Example responses
200 Response
{"email":"user@example.com","displayName":"string","orgId":"25b2c2d5-a7fc-47d0-89e4-8709a1560bfa","bio":"string","roles":["string"],"lock":true}
{
"email": "user@example.com",
"displayName": "string",
"orgId": "25b2c2d5-a7fc-47d0-89e4-8709a1560bfa",
"bio": "string",
"roles": [
"string"
],
"lock": true
}
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | RegisterDto |
POST /api/elevated/Accounts/{email}
POST /api/elevated/Accounts/{email}
Body parameter
{
"email": "user@example.com",
"displayName": "string",
"orgId": "25b2c2d5-a7fc-47d0-89e4-8709a1560bfa",
"bio": "string",
"roles": [
"string"
],
"lock": true
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
path | string | true | none | |
body | body | RegisterDto | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
Buggy
GET /api/Buggy/not-found
GET /api/Buggy/not-found
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/Buggy/bad-request
GET /api/Buggy/bad-request
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/Buggy/server-error
GET /api/Buggy/server-error
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/Buggy/unauthorised
GET /api/Buggy/unauthorised
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
Discussion
GET /api/Discussion/{reference}
GET /api/Discussion/{reference}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
reference | path | string | true | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Discussion
POST /api/Discussion
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"reference": "string",
"section": "string",
"topic": "string",
"description": "string",
"postedBy": "string",
"timestamp": "2019-08-24T14:15:22Z",
"mentions": [
"string"
],
"tags": [
"string"
],
"replies": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"discussionId": "9a94c521-c61a-42fa-ab06-09bac5ba5181",
"body": "string",
"postedBy": "string",
"timestamp": "2019-08-24T14:15:22Z",
"mentions": [
"string"
],
"tags": [
"string"
]
}
]
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
body | body | Discussion | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Discussion/{id}
POST /api/Discussion/{id}
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"reference": "string",
"section": "string",
"topic": "string",
"description": "string",
"postedBy": "string",
"timestamp": "2019-08-24T14:15:22Z",
"mentions": [
"string"
],
"tags": [
"string"
],
"replies": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"discussionId": "9a94c521-c61a-42fa-ab06-09bac5ba5181",
"body": "string",
"postedBy": "string",
"timestamp": "2019-08-24T14:15:22Z",
"mentions": [
"string"
],
"tags": [
"string"
]
}
]
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
body | body | Discussion | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
DELETE /api/Discussion/{id}
DELETE /api/Discussion/{id}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Discussion/{discussionId}/reply
POST /api/Discussion/{discussionId}/reply
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"discussionId": "9a94c521-c61a-42fa-ab06-09bac5ba5181",
"body": "string",
"postedBy": "string",
"timestamp": "2019-08-24T14:15:22Z",
"mentions": [
"string"
],
"tags": [
"string"
]
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
discussionId | path | string(uuid) | true | none |
body | body | Reply | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Discussion/{discussionId}/reply/{id}
POST /api/Discussion/{discussionId}/reply/{id}
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"discussionId": "9a94c521-c61a-42fa-ab06-09bac5ba5181",
"body": "string",
"postedBy": "string",
"timestamp": "2019-08-24T14:15:22Z",
"mentions": [
"string"
],
"tags": [
"string"
]
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
discussionId | path | string(uuid) | true | none |
id | path | string(uuid) | true | none |
body | body | Reply | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
DELETE /api/Discussion/{discussionId}/reply/{id}
DELETE /api/Discussion/{discussionId}/reply/{id}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
discussionId | path | string(uuid) | true | none |
id | path | string(uuid) | true | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
Gene
GET /api/Gene
GET /api/Gene
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Gene
POST /api/Gene
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"accessionNumber": "string",
"geneName": "string",
"function": "string",
"product": "string",
"functionalCategory": "string",
"geneExternalIds": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"externalIdRef": "string",
"externalId": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"genePublicData": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"type": "string",
"proteomics": "string",
"mutant": "string",
"comments": "string",
"start": "string",
"end": "string",
"orientation": "string",
"geneLength": "string",
"location": "string",
"geneSequence": "string",
"molecularMass": "string",
"isoelectricPoint": "string",
"proteinLength": "string",
"proteinSequence": "string",
"pfam": "string",
"m/Leprae": "string",
"m/Marinum": "string",
"m/Smegmatis": "string",
"cryo": "string",
"xRay": "string",
"model": "string",
"ligand": "string"
},
"geneEssentiality": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"classification": "string",
"condition": "string",
"strain": "string",
"method": "string",
"reference": "string",
"notes": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneProteinProduction": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"production": "string",
"method": "string",
"purity": "string",
"date": "2019-08-24T14:15:22Z",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneProteinActivityAssay": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"activity": "string",
"type": "string",
"throughput": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneCRISPRiStrain": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"crispRiStrain": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneResistanceMutation": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"mutation": "string",
"isolate": "string",
"parentStrain": "string",
"compound": "string",
"shiftInMIC": "string",
"org": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneVulnerability": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"rank": "string",
"uVi": "string",
"iVi": "string",
"viRatio": "string",
"vulnerabilityCondition": "string",
"operon": "string",
"confounded": "string",
"shell2015Operon": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneHypomorphs": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"knockdownStrain": "string",
"phenotype": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneUnpublishedStructures": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"organization": "string",
"method": "string",
"resolution": "string",
"ligands": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
]
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
body | body | Gene | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/Gene/{id}
GET /api/Gene/{id}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Gene/{id}
POST /api/Gene/{id}
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"accessionNumber": "string",
"geneName": "string",
"function": "string",
"product": "string",
"functionalCategory": "string",
"genePublicData": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"type": "string",
"proteomics": "string",
"mutant": "string",
"comments": "string",
"start": "string",
"end": "string",
"orientation": "string",
"geneLength": "string",
"location": "string",
"geneSequence": "string",
"molecularMass": "string",
"isoelectricPoint": "string",
"proteinLength": "string",
"proteinSequence": "string",
"pfam": "string",
"m/Leprae": "string",
"m/Marinum": "string",
"m/Smegmatis": "string",
"cryo": "string",
"xRay": "string",
"model": "string",
"ligand": "string"
}
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
body | body | GenePublicEditDTO | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
DELETE /api/Gene/{id}
DELETE /api/Gene/{id}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/Gene/by-accession/{accessionNo}
GET /api/Gene/by-accession/{accessionNo}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
accessionNo | path | string | true | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/Gene/{id}/history
GET /api/Gene/{id}/history
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Gene/promotionrequest/{targetName}
POST /api/Gene/promotionrequest/{targetName}
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"genePromtionRequestGenes": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"genePromotionRequestId": "ef12751d-8cf1-4196-aef2-f96d96d25b46",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9"
}
],
"targetName": "string",
"targetType": "string",
"genePromotionRequestStatus": "string",
"genePromotionRequestValues": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"genePromotionRequestId": "ef12751d-8cf1-4196-aef2-f96d96d25b46",
"question": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"identification": "string",
"module": "string",
"subModule": "string",
"questionBody": "string",
"notes": "string",
"toolTip": "string",
"possibleAnswers": [
"string"
]
},
"questionId": "ffa0420e-f70b-4e5b-99a0-434bff860467",
"answer": "string",
"description": "string",
"answerdBy": "string"
}
]
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
targetName | path | string | true | none |
body | body | GenePromotionRequest | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/Gene/{id}/promotionrequest
GET /api/Gene/{id}/promotionrequest
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
targetName | query | string | false | none |
id | path | string | true | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/Gene/{targetName}/validateNewTargetName
GET /api/Gene/{targetName}/validateNewTargetName
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
targetName | path | string | true | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Gene/{geneId}/essentiality
POST /api/Gene/{geneId}/essentiality
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"classification": "string",
"condition": "string",
"strain": "string",
"method": "string",
"reference": "string",
"notes": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
geneId | path | string(uuid) | true | none |
body | body | GeneEssentiality | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Gene/{geneId}/essentiality/{id}
POST /api/Gene/{geneId}/essentiality/{id}
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"classification": "string",
"condition": "string",
"strain": "string",
"method": "string",
"reference": "string",
"notes": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
geneId | path | string(uuid) | true | none |
id | path | string(uuid) | true | none |
body | body | GeneEssentiality | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Gene/{geneId}/proteinproduction
POST /api/Gene/{geneId}/proteinproduction
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"production": "string",
"method": "string",
"purity": "string",
"date": "2019-08-24T14:15:22Z",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
geneId | path | string(uuid) | true | none |
body | body | GeneProteinProduction | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Gene/{geneId}/proteinproduction/{id}
POST /api/Gene/{geneId}/proteinproduction/{id}
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"production": "string",
"method": "string",
"purity": "string",
"date": "2019-08-24T14:15:22Z",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
geneId | path | string(uuid) | true | none |
id | path | string(uuid) | true | none |
body | body | GeneProteinProduction | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Gene/{geneId}/proteinactivityassay
POST /api/Gene/{geneId}/proteinactivityassay
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"activity": "string",
"type": "string",
"throughput": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
geneId | path | string(uuid) | true | none |
body | body | GeneProteinActivityAssay | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Gene/{geneId}/proteinactivityassay/{id}
POST /api/Gene/{geneId}/proteinactivityassay/{id}
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"activity": "string",
"type": "string",
"throughput": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
geneId | path | string(uuid) | true | none |
id | path | string(uuid) | true | none |
body | body | GeneProteinActivityAssay | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Gene/{geneId}/crispristrain
POST /api/Gene/{geneId}/crispristrain
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"crispRiStrain": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
geneId | path | string(uuid) | true | none |
body | body | GeneCRISPRiStrain | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Gene/{geneId}/crispristrain/{id}
POST /api/Gene/{geneId}/crispristrain/{id}
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"crispRiStrain": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
geneId | path | string(uuid) | true | none |
id | path | string(uuid) | true | none |
body | body | GeneCRISPRiStrain | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Gene/{geneId}/resistancemutation
POST /api/Gene/{geneId}/resistancemutation
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"mutation": "string",
"isolate": "string",
"parentStrain": "string",
"compound": "string",
"shiftInMIC": "string",
"org": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
geneId | path | string(uuid) | true | none |
body | body | GeneResistanceMutation | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Gene/{geneId}/resistancemutation/{id}
POST /api/Gene/{geneId}/resistancemutation/{id}
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"mutation": "string",
"isolate": "string",
"parentStrain": "string",
"compound": "string",
"shiftInMIC": "string",
"org": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
geneId | path | string(uuid) | true | none |
id | path | string(uuid) | true | none |
body | body | GeneResistanceMutation | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Gene/{geneId}/unpublishedstructures
POST /api/Gene/{geneId}/unpublishedstructures
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"organization": "string",
"method": "string",
"resolution": "string",
"ligands": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
geneId | path | string(uuid) | true | none |
body | body | GeneUnpublishedStructures | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Gene/{geneId}/unpublishedstructures/{id}
POST /api/Gene/{geneId}/unpublishedstructures/{id}
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"organization": "string",
"method": "string",
"resolution": "string",
"ligands": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
geneId | path | string(uuid) | true | none |
id | path | string(uuid) | true | none |
body | body | GeneUnpublishedStructures | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Gene/{geneId}/vulnerability
POST /api/Gene/{geneId}/vulnerability
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"rank": "string",
"uVi": "string",
"iVi": "string",
"viRatio": "string",
"vulnerabilityCondition": "string",
"operon": "string",
"confounded": "string",
"shell2015Operon": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
geneId | path | string(uuid) | true | none |
body | body | GeneVulnerability | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Gene/{geneId}/vulnerability/{id}
POST /api/Gene/{geneId}/vulnerability/{id}
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"rank": "string",
"uVi": "string",
"iVi": "string",
"viRatio": "string",
"vulnerabilityCondition": "string",
"operon": "string",
"confounded": "string",
"shell2015Operon": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
geneId | path | string(uuid) | true | none |
id | path | string(uuid) | true | none |
body | body | GeneVulnerability | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Gene/{geneId}/hypomorph
POST /api/Gene/{geneId}/hypomorph
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"knockdownStrain": "string",
"phenotype": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
geneId | path | string(uuid) | true | none |
body | body | GeneHypomorph | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Gene/{geneId}/hypomorph/{id}
POST /api/Gene/{geneId}/hypomorph/{id}
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"knockdownStrain": "string",
"phenotype": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
geneId | path | string(uuid) | true | none |
id | path | string(uuid) | true | none |
body | body | GeneHypomorph | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/elevated/Gene/promotionrequests
GET /api/elevated/Gene/promotionrequests
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/elevated/Gene/groups
GET /api/elevated/Gene/groups
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Gene/groups
POST /api/elevated/Gene/groups
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"name": "string",
"type": "string",
"genes": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneGroupId": "ee44a9df-bc3d-455e-9532-c0c75cc025f5",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"accessionNumber": "string",
"gene": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"accessionNumber": "string",
"geneName": "string",
"function": "string",
"product": "string",
"functionalCategory": "string",
"geneExternalIds": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"externalIdRef": "string",
"externalId": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"genePublicData": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"type": "string",
"proteomics": "string",
"mutant": "string",
"comments": "string",
"start": "string",
"end": "string",
"orientation": "string",
"geneLength": "string",
"location": "string",
"geneSequence": "string",
"molecularMass": "string",
"isoelectricPoint": "string",
"proteinLength": "string",
"proteinSequence": "string",
"pfam": "string",
"m/Leprae": "string",
"m/Marinum": "string",
"m/Smegmatis": "string",
"cryo": "string",
"xRay": "string",
"model": "string",
"ligand": "string"
},
"geneEssentiality": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"classification": "string",
"condition": "string",
"strain": "string",
"method": "string",
"reference": "string",
"notes": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneProteinProduction": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"production": "string",
"method": "string",
"purity": "string",
"date": "2019-08-24T14:15:22Z",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneProteinActivityAssay": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"activity": "string",
"type": "string",
"throughput": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneCRISPRiStrain": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"crispRiStrain": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneResistanceMutation": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"mutation": "string",
"isolate": "string",
"parentStrain": "string",
"compound": "string",
"shiftInMIC": "string",
"org": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneVulnerability": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"rank": "string",
"uVi": "string",
"iVi": "string",
"viRatio": "string",
"vulnerabilityCondition": "string",
"operon": "string",
"confounded": "string",
"shell2015Operon": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneHypomorphs": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"knockdownStrain": "string",
"phenotype": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneUnpublishedStructures": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"organization": "string",
"method": "string",
"resolution": "string",
"ligands": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
]
},
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98"
}
]
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
body | body | GeneGroup | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/elevated/Gene/groups/{groupId}
GET /api/elevated/Gene/groups/{groupId}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
groupId | path | string(uuid) | true | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Gene/{accessionNo}/externalId
POST /api/elevated/Gene/{accessionNo}/externalId
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"externalIdRef": "string",
"externalId": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
accessionNo | path | string | true | none |
body | body | GeneExternalId | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GeneConfig
GET /api/GeneConfig/promote/questionaire
GET /api/GeneConfig/promote/questionaire
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/GeneConfig/groups/search-by-gene-id/{geneId}
GET /api/GeneConfig/groups/search-by-gene-id/{geneId}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
geneId | path | string(uuid) | true | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
General
GET /api/General/app-vars
GET /api/General/app-vars
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
Hit
POST /api/Hit
POST /api/Hit
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"screenId": "0a3dc761-8e38-4c8a-ab93-391c2eb0c3c1",
"externalCompoundIds": "string",
"targetName": "string",
"library": "string",
"source": "string",
"method": "string",
"mic": 0,
"micCondition": "string",
"iC50": 0,
"clusterGroup": "string",
"smile": "string",
"molWeight": "string",
"molArea": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
body | body | HitCSVDTO | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
Horizon
GET /api/Horizon/{entryPointName}
GET /api/Horizon/{entryPointName}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
entryPointName | path | string | true | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/Horizon/by-accession/{accessionNumber}
GET /api/Horizon/by-accession/{accessionNumber}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
accessionNumber | path | string | true | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
Project
GET /api/Project
GET /api/Project
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/Project/{id}
GET /api/Project/{id}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Project/{id}
POST /api/Project/{id}
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"teamPriority": "string",
"teamPriorityDescription": "string",
"teamProbability": "string",
"teamProbabilityDescription": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
body | body | ProjectPriorityProbabilityDTO | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/Project/{projectId}/compoundevolution
GET /api/Project/{projectId}/compoundevolution
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
projectId | path | string(uuid) | true | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Project
POST /api/elevated/Project
Body parameter
{
"projectName": "string",
"screenId": "0a3dc761-8e38-4c8a-ab93-391c2eb0c3c1",
"baseHits": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"screenId": "0a3dc761-8e38-4c8a-ab93-391c2eb0c3c1",
"targetName": "string",
"library": "string",
"source": "string",
"method": "string",
"mic": 0,
"micCondition": "string",
"iC50": 0,
"clusterGroup": 0,
"compoundId": "7bd121cb-f376-4a53-aaa0-99a4ed392648",
"compound": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"externalCompoundIds": "string",
"smile": "string",
"molWeight": "string",
"molArea": "string",
"createdAt": "2019-08-24T14:15:22Z"
},
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string",
"voteId": "fe9ca470-231f-4db6-a89a-539efac0ad92",
"vote": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"elementId": "7d5101f9-b2fe-42c1-88fa-7ad5ef49633e",
"positive": 0,
"neutral": 0,
"negative": 0,
"isVotingAllowed": true,
"lastModified": "2019-08-24T14:15:22Z",
"voters": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"voteId": "fe9ca470-231f-4db6-a89a-539efac0ad92",
"voterEmail": "string",
"votedPositive": true,
"votedNeutral": true,
"votedNegative": true,
"votedOn": "2019-08-24T14:15:22Z",
"comment": "string"
}
],
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
}
],
"representationStructure": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"externalCompoundIds": "string",
"smile": "string",
"molWeight": "string",
"molArea": "string",
"createdAt": "2019-08-24T14:15:22Z"
},
"primaryOrg": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"name": "string",
"alias": "string",
"address": "string"
},
"supportingOrgs": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"name": "string",
"alias": "string",
"address": "string"
}
],
"fhaStart": "2019-08-24T14:15:22Z",
"fhaDescription": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
body | body | ProjectCreateDTO | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Project/unlinked
POST /api/elevated/Project/unlinked
Body parameter
{
"projectName": "string",
"representationStructure": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"externalCompoundIds": "string",
"smile": "string",
"molWeight": "string",
"molArea": "string",
"createdAt": "2019-08-24T14:15:22Z"
},
"representationStructureSMILE": "string",
"representationStructureExternalCompoundIds": "string",
"primaryOrg": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"name": "string",
"alias": "string",
"address": "string"
},
"supportingOrgs": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"name": "string",
"alias": "string",
"address": "string"
}
],
"fhaStart": "2019-08-24T14:15:22Z",
"fhaDescription": "string",
"molWeight": "string",
"molArea": "string",
"mic": 0,
"iC50": 0
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
body | body | UnlinkedProjectCreateDTO | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Project/{id}
POST /api/elevated/Project/{id}
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"priority": "string",
"priorityDescription": "string",
"probability": "string",
"probabilityDescription": "string",
"teamPriority": "string",
"teamPriorityDescription": "string",
"teamProbability": "string",
"teamProbabilityDescription": "string",
"fhaStart": "2019-08-24T14:15:22Z",
"fhaPredictedStart": "2019-08-24T14:15:22Z",
"fhaDescription": "string",
"h2LStart": "2019-08-24T14:15:22Z",
"h2LPredictedStart": "2019-08-24T14:15:22Z",
"h2LDescription": "string",
"loStart": "2019-08-24T14:15:22Z",
"loPredictedStart": "2019-08-24T14:15:22Z",
"loDescription": "string",
"spStart": "2019-08-24T14:15:22Z",
"spPredictedStart": "2019-08-24T14:15:22Z",
"spDescription": "string",
"pcdDate": "2019-08-24T14:15:22Z",
"pcdDescription": "string",
"indStart": "2019-08-24T14:15:22Z",
"indPredictedStart": "2019-08-24T14:15:22Z",
"indDescription": "string",
"clinicalP1Start": "2019-08-24T14:15:22Z",
"clinicalP1PredictedStart": "2019-08-24T14:15:22Z",
"clinicalP1Description": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
body | body | ProjectEditDTO | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Project/{id}/terminate
POST /api/elevated/Project/{id}/terminate
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"projectName": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
body | body | ProjectTerminateDTO | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Project/{id}/createH2L
POST /api/elevated/Project/{id}/createH2L
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"h2LStart": "2019-08-24T14:15:22Z",
"h2LDescription": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
body | body | H2LDTO | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Project/{id}/createLO
POST /api/elevated/Project/{id}/createLO
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"loStart": "2019-08-24T14:15:22Z",
"loDescription": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
body | body | LODTO | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Project/{id}/createSP
POST /api/elevated/Project/{id}/createSP
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"spStart": "2019-08-24T14:15:22Z",
"spDescription": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
body | body | SPDTO | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Project/{id}/createIND
POST /api/elevated/Project/{id}/createIND
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"indStart": "2019-08-24T14:15:22Z",
"indDescription": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
body | body | INDDTO | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Project/{id}/createP1
POST /api/elevated/Project/{id}/createP1
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"p1Start": "2019-08-24T14:15:22Z",
"p1Description": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
body | body | P1DTO | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Project/{projectId}/compoundevolution
POST /api/elevated/Project/{projectId}/compoundevolution
Body parameter
{
"smile": "string",
"molWeight": "string",
"molArea": "string",
"projectId": "5a8591dd-4039-49df-9202-96385ba3eff8",
"notes": "string",
"mic": 0,
"iC50": 0,
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
projectId | path | string(uuid) | true | none |
body | body | CompoundEvolutionAddDTO | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
Screen
POST /api/Screen
POST /api/Screen
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"baseTarget": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"name": "string",
"type": "string",
"targetGenes": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"targetId": "cbca1126-180e-4334-9df8-cf82289d378b",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"accessionNumber": "string",
"gene": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"accessionNumber": "string",
"geneName": "string",
"function": "string",
"product": "string",
"functionalCategory": "string",
"geneExternalIds": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"externalIdRef": "string",
"externalId": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"genePublicData": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"type": "string",
"proteomics": "string",
"mutant": "string",
"comments": "string",
"start": "string",
"end": "string",
"orientation": "string",
"geneLength": "string",
"location": "string",
"geneSequence": "string",
"molecularMass": "string",
"isoelectricPoint": "string",
"proteinLength": "string",
"proteinSequence": "string",
"pfam": "string",
"m/Leprae": "string",
"m/Marinum": "string",
"m/Smegmatis": "string",
"cryo": "string",
"xRay": "string",
"model": "string",
"ligand": "string"
},
"geneEssentiality": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"classification": "string",
"condition": "string",
"strain": "string",
"method": "string",
"reference": "string",
"notes": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneProteinProduction": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"production": "string",
"method": "string",
"purity": "string",
"date": "2019-08-24T14:15:22Z",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneProteinActivityAssay": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"activity": "string",
"type": "string",
"throughput": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneCRISPRiStrain": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"crispRiStrain": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneResistanceMutation": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"mutation": "string",
"isolate": "string",
"parentStrain": "string",
"compound": "string",
"shiftInMIC": "string",
"org": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneVulnerability": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"rank": "string",
"uVi": "string",
"iVi": "string",
"viRatio": "string",
"vulnerabilityCondition": "string",
"operon": "string",
"confounded": "string",
"shell2015Operon": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneHypomorphs": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"knockdownStrain": "string",
"phenotype": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneUnpublishedStructures": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"organization": "string",
"method": "string",
"resolution": "string",
"ligands": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
]
},
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98"
}
],
"bucket": "string",
"impactScore": 0,
"impactComplete": 0,
"likeScore": 0,
"likeComplete": 0,
"screeningScore": 0,
"screeningComplete": 0,
"structureScore": 0,
"structureComplete": 0,
"vulnerabilityRatio": 0,
"vulnerabilityRank": 0,
"htsFeasibility": 0,
"sbdFeasibility": 0,
"progressibility": 0,
"safety": 0,
"targetScorecard": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"targetID": "cbb7866b-27ff-4bfe-b93a-e06c7aea73b6",
"targetName": "string",
"targetScoreCardValues": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"targetScorecardId": "b77ee3ac-0dd1-477f-8ec3-dc97fdae7d31",
"targetName": "string",
"question": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"identification": "string",
"module": "string",
"subModule": "string",
"questionBody": "string",
"notes": "string",
"toolTip": "string",
"possibleAnswers": [
"string"
]
},
"questionId": "ffa0420e-f70b-4e5b-99a0-434bff860467",
"questionIdentification": "string",
"questionModule": "string",
"questionSubModule": "string",
"answer": "string",
"description": "string",
"answerdBy": "string"
}
],
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
},
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string",
"background": "string",
"enablement": "string",
"strategy": "string",
"challenges": "string"
},
"targetId": "cbca1126-180e-4334-9df8-cf82289d378b",
"screenName": "string",
"screenType": "string",
"method": "string",
"targetName": "string",
"geneName": "string",
"status": "string",
"org": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"name": "string",
"alias": "string",
"address": "string"
},
"orgId": "25b2c2d5-a7fc-47d0-89e4-8709a1560bfa",
"promotionDate": "2019-08-24T14:15:22Z",
"promoter": "string",
"screenSequences": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"screenId": "0a3dc761-8e38-4c8a-ab93-391c2eb0c3c1",
"targetName": "string",
"method": "string",
"protocol": "string",
"library": "string",
"scientist": "string",
"startDate": "2019-08-24T14:15:22Z",
"endDate": "2019-08-24T14:15:22Z",
"unverifiedHitCount": 0,
"noOfCompoundsScreened": 0,
"concentration": 0,
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"validatedHits": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"screenId": "0a3dc761-8e38-4c8a-ab93-391c2eb0c3c1",
"targetName": "string",
"library": "string",
"source": "string",
"method": "string",
"mic": 0,
"micCondition": "string",
"iC50": 0,
"clusterGroup": 0,
"compoundId": "7bd121cb-f376-4a53-aaa0-99a4ed392648",
"compound": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"externalCompoundIds": "string",
"smile": "string",
"molWeight": "string",
"molArea": "string",
"createdAt": "2019-08-24T14:15:22Z"
},
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string",
"voteId": "fe9ca470-231f-4db6-a89a-539efac0ad92",
"vote": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"elementId": "7d5101f9-b2fe-42c1-88fa-7ad5ef49633e",
"positive": 0,
"neutral": 0,
"negative": 0,
"isVotingAllowed": true,
"lastModified": "2019-08-24T14:15:22Z",
"voters": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"voteId": "fe9ca470-231f-4db6-a89a-539efac0ad92",
"voterEmail": "string",
"votedPositive": true,
"votedNeutral": true,
"votedNegative": true,
"votedOn": "2019-08-24T14:15:22Z",
"comment": "string"
}
],
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
}
],
"notes": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
body | body | Screen | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/Screen
GET /api/Screen
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/Screen/phenotypic
POST /api/Screen/phenotypic
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"baseTarget": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"name": "string",
"type": "string",
"targetGenes": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"targetId": "cbca1126-180e-4334-9df8-cf82289d378b",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"accessionNumber": "string",
"gene": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"accessionNumber": "string",
"geneName": "string",
"function": "string",
"product": "string",
"functionalCategory": "string",
"geneExternalIds": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"externalIdRef": "string",
"externalId": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"genePublicData": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"type": "string",
"proteomics": "string",
"mutant": "string",
"comments": "string",
"start": "string",
"end": "string",
"orientation": "string",
"geneLength": "string",
"location": "string",
"geneSequence": "string",
"molecularMass": "string",
"isoelectricPoint": "string",
"proteinLength": "string",
"proteinSequence": "string",
"pfam": "string",
"m/Leprae": "string",
"m/Marinum": "string",
"m/Smegmatis": "string",
"cryo": "string",
"xRay": "string",
"model": "string",
"ligand": "string"
},
"geneEssentiality": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"classification": "string",
"condition": "string",
"strain": "string",
"method": "string",
"reference": "string",
"notes": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneProteinProduction": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"production": "string",
"method": "string",
"purity": "string",
"date": "2019-08-24T14:15:22Z",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneProteinActivityAssay": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"activity": "string",
"type": "string",
"throughput": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneCRISPRiStrain": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"crispRiStrain": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneResistanceMutation": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"mutation": "string",
"isolate": "string",
"parentStrain": "string",
"compound": "string",
"shiftInMIC": "string",
"org": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneVulnerability": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"rank": "string",
"uVi": "string",
"iVi": "string",
"viRatio": "string",
"vulnerabilityCondition": "string",
"operon": "string",
"confounded": "string",
"shell2015Operon": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneHypomorphs": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"knockdownStrain": "string",
"phenotype": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneUnpublishedStructures": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"organization": "string",
"method": "string",
"resolution": "string",
"ligands": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
]
},
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98"
}
],
"bucket": "string",
"impactScore": 0,
"impactComplete": 0,
"likeScore": 0,
"likeComplete": 0,
"screeningScore": 0,
"screeningComplete": 0,
"structureScore": 0,
"structureComplete": 0,
"vulnerabilityRatio": 0,
"vulnerabilityRank": 0,
"htsFeasibility": 0,
"sbdFeasibility": 0,
"progressibility": 0,
"safety": 0,
"targetScorecard": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"targetID": "cbb7866b-27ff-4bfe-b93a-e06c7aea73b6",
"targetName": "string",
"targetScoreCardValues": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"targetScorecardId": "b77ee3ac-0dd1-477f-8ec3-dc97fdae7d31",
"targetName": "string",
"question": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"identification": "string",
"module": "string",
"subModule": "string",
"questionBody": "string",
"notes": "string",
"toolTip": "string",
"possibleAnswers": [
"string"
]
},
"questionId": "ffa0420e-f70b-4e5b-99a0-434bff860467",
"questionIdentification": "string",
"questionModule": "string",
"questionSubModule": "string",
"answer": "string",
"description": "string",
"answerdBy": "string"
}
],
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
},
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string",
"background": "string",
"enablement": "string",
"strategy": "string",
"challenges": "string"
},
"targetId": "cbca1126-180e-4334-9df8-cf82289d378b",
"screenName": "string",
"screenType": "string",
"method": "string",
"targetName": "string",
"geneName": "string",
"status": "string",
"org": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"name": "string",
"alias": "string",
"address": "string"
},
"orgId": "25b2c2d5-a7fc-47d0-89e4-8709a1560bfa",
"promotionDate": "2019-08-24T14:15:22Z",
"promoter": "string",
"screenSequences": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"screenId": "0a3dc761-8e38-4c8a-ab93-391c2eb0c3c1",
"targetName": "string",
"method": "string",
"protocol": "string",
"library": "string",
"scientist": "string",
"startDate": "2019-08-24T14:15:22Z",
"endDate": "2019-08-24T14:15:22Z",
"unverifiedHitCount": 0,
"noOfCompoundsScreened": 0,
"concentration": 0,
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"validatedHits": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"screenId": "0a3dc761-8e38-4c8a-ab93-391c2eb0c3c1",
"targetName": "string",
"library": "string",
"source": "string",
"method": "string",
"mic": 0,
"micCondition": "string",
"iC50": 0,
"clusterGroup": 0,
"compoundId": "7bd121cb-f376-4a53-aaa0-99a4ed392648",
"compound": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"externalCompoundIds": "string",
"smile": "string",
"molWeight": "string",
"molArea": "string",
"createdAt": "2019-08-24T14:15:22Z"
},
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string",
"voteId": "fe9ca470-231f-4db6-a89a-539efac0ad92",
"vote": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"elementId": "7d5101f9-b2fe-42c1-88fa-7ad5ef49633e",
"positive": 0,
"neutral": 0,
"negative": 0,
"isVotingAllowed": true,
"lastModified": "2019-08-24T14:15:22Z",
"voters": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"voteId": "fe9ca470-231f-4db6-a89a-539efac0ad92",
"voterEmail": "string",
"votedPositive": true,
"votedNeutral": true,
"votedNegative": true,
"votedOn": "2019-08-24T14:15:22Z",
"comment": "string"
}
],
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
}
],
"notes": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
body | body | Screen | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/Screen/phenotypic
GET /api/Screen/phenotypic
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/Screen/{id}
GET /api/Screen/{id}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
ScreenSequence
POST /api/ScreenSequence/{screenId}
POST /api/ScreenSequence/{screenId}
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"screenId": "0a3dc761-8e38-4c8a-ab93-391c2eb0c3c1",
"targetName": "string",
"method": "string",
"protocol": "string",
"library": "string",
"scientist": "string",
"startDate": "2019-08-24T14:15:22Z",
"endDate": "2019-08-24T14:15:22Z",
"unverifiedHitCount": 0,
"noOfCompoundsScreened": 0,
"concentration": 0,
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
screenId | path | string(uuid) | true | none |
body | body | ScreenSequence | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
Sync
GET /api/batch/gene/Sync
GET /api/batch/gene/Sync
Example responses
200 Response
{"id":"497f6eca-6276-4993-bfeb-53cbbbba6f08","status":"string","type":"string","dateCreated":"2019-08-24T14:15:22Z","dateCompleted":"2019-08-24T14:15:22Z"}
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"status": "string",
"type": "string",
"dateCreated": "2019-08-24T14:15:22Z",
"dateCompleted": "2019-08-24T14:15:22Z"
}
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | BTask |
GET /api/batch/gene/Sync/{id}
GET /api/batch/gene/Sync/{id}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string | true | none |
Example responses
200 Response
{"header":{"items":[{}]},"data":{"characters":"string"}}
{
"header": {
"items": [
{}
]
},
"data": {
"characters": "string"
}
}
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | Sequence |
Target
GET /api/Target
GET /api/Target
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/Target/{id}
GET /api/Target/{id}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
GET /api/Target/{id}/history
GET /api/Target/{id}/history
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Target
POST /api/elevated/Target
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"genePromtionRequestGenes": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"genePromotionRequestId": "ef12751d-8cf1-4196-aef2-f96d96d25b46",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9"
}
],
"targetName": "string",
"targetType": "string",
"genePromotionRequestStatus": "string",
"genePromotionRequestValues": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"genePromotionRequestId": "ef12751d-8cf1-4196-aef2-f96d96d25b46",
"question": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"identification": "string",
"module": "string",
"subModule": "string",
"questionBody": "string",
"notes": "string",
"toolTip": "string",
"possibleAnswers": [
"string"
]
},
"questionId": "ffa0420e-f70b-4e5b-99a0-434bff860467",
"answer": "string",
"description": "string",
"answerdBy": "string"
}
]
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
body | body | GenePromotionRequest | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Target/{id}
POST /api/elevated/Target/{id}
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"name": "string",
"type": "string",
"targetGenes": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"targetId": "cbca1126-180e-4334-9df8-cf82289d378b",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"accessionNumber": "string",
"gene": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"accessionNumber": "string",
"geneName": "string",
"function": "string",
"product": "string",
"functionalCategory": "string",
"geneExternalIds": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"externalIdRef": "string",
"externalId": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"genePublicData": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"type": "string",
"proteomics": "string",
"mutant": "string",
"comments": "string",
"start": "string",
"end": "string",
"orientation": "string",
"geneLength": "string",
"location": "string",
"geneSequence": "string",
"molecularMass": "string",
"isoelectricPoint": "string",
"proteinLength": "string",
"proteinSequence": "string",
"pfam": "string",
"m/Leprae": "string",
"m/Marinum": "string",
"m/Smegmatis": "string",
"cryo": "string",
"xRay": "string",
"model": "string",
"ligand": "string"
},
"geneEssentiality": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"classification": "string",
"condition": "string",
"strain": "string",
"method": "string",
"reference": "string",
"notes": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneProteinProduction": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"production": "string",
"method": "string",
"purity": "string",
"date": "2019-08-24T14:15:22Z",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneProteinActivityAssay": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"activity": "string",
"type": "string",
"throughput": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneCRISPRiStrain": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"crispRiStrain": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneResistanceMutation": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"mutation": "string",
"isolate": "string",
"parentStrain": "string",
"compound": "string",
"shiftInMIC": "string",
"org": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneVulnerability": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"rank": "string",
"uVi": "string",
"iVi": "string",
"viRatio": "string",
"vulnerabilityCondition": "string",
"operon": "string",
"confounded": "string",
"shell2015Operon": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneHypomorphs": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"knockdownStrain": "string",
"phenotype": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneUnpublishedStructures": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"organization": "string",
"method": "string",
"resolution": "string",
"ligands": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
]
},
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98"
}
],
"bucket": "string",
"impactScore": 0,
"impactComplete": 0,
"likeScore": 0,
"likeComplete": 0,
"screeningScore": 0,
"screeningComplete": 0,
"structureScore": 0,
"structureComplete": 0,
"vulnerabilityRatio": 0,
"vulnerabilityRank": 0,
"htsFeasibility": 0,
"sbdFeasibility": 0,
"progressibility": 0,
"safety": 0,
"targetScorecard": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"targetID": "cbb7866b-27ff-4bfe-b93a-e06c7aea73b6",
"targetName": "string",
"targetScoreCardValues": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"targetScorecardId": "b77ee3ac-0dd1-477f-8ec3-dc97fdae7d31",
"targetName": "string",
"question": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"identification": "string",
"module": "string",
"subModule": "string",
"questionBody": "string",
"notes": "string",
"toolTip": "string",
"possibleAnswers": [
"string"
]
},
"questionId": "ffa0420e-f70b-4e5b-99a0-434bff860467",
"questionIdentification": "string",
"questionModule": "string",
"questionSubModule": "string",
"answer": "string",
"description": "string",
"answerdBy": "string"
}
],
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
},
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string",
"background": "string",
"enablement": "string",
"strategy": "string",
"challenges": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
body | body | Target | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Target/{id}/summary
POST /api/elevated/Target/{id}/summary
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"background": "string",
"enablement": "string",
"strategy": "string",
"challenges": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
body | body | TargetSummaryDTO | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Target/import
POST /api/elevated/Target/import
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"genePromtionRequestGenes": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"genePromotionRequestId": "ef12751d-8cf1-4196-aef2-f96d96d25b46",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9"
}
],
"targetName": "string",
"targetType": "string",
"genePromotionRequestStatus": "string",
"genePromotionRequestValues": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"genePromotionRequestId": "ef12751d-8cf1-4196-aef2-f96d96d25b46",
"question": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"identification": "string",
"module": "string",
"subModule": "string",
"questionBody": "string",
"notes": "string",
"toolTip": "string",
"possibleAnswers": [
"string"
]
},
"questionId": "ffa0420e-f70b-4e5b-99a0-434bff860467",
"answer": "string",
"description": "string",
"answerdBy": "string"
}
],
"bucket": "string",
"simpleProteinAccessionNumber": "string",
"impactScore": 0,
"impactComplete": 0,
"likeScore": 0,
"likeComplete": 0,
"screeningScore": 0,
"screeningComplete": 0,
"structureScore": 0,
"structureComplete": 0,
"vulnerabilityRatio": 0,
"vulnerabilityRank": 0,
"htsFeasibility": 0,
"sbdFeasibility": 0,
"progressibility": 0,
"safety": 0
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
body | body | TargetImportDTO | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Target/importComplex
POST /api/elevated/Target/importComplex
Body parameter
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"genePromtionRequestGenes": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"genePromotionRequestId": "ef12751d-8cf1-4196-aef2-f96d96d25b46",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9"
}
],
"targetName": "string",
"targetType": "string",
"genePromotionRequestStatus": "string",
"genePromotionRequestValues": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"genePromotionRequestId": "ef12751d-8cf1-4196-aef2-f96d96d25b46",
"question": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"identification": "string",
"module": "string",
"subModule": "string",
"questionBody": "string",
"notes": "string",
"toolTip": "string",
"possibleAnswers": [
"string"
]
},
"questionId": "ffa0420e-f70b-4e5b-99a0-434bff860467",
"answer": "string",
"description": "string",
"answerdBy": "string"
}
],
"bucket": "string",
"simpleProteinAccessionNumber": "string",
"impactScore": 0,
"impactComplete": 0,
"likeScore": 0,
"likeComplete": 0,
"screeningScore": 0,
"screeningComplete": 0,
"structureScore": 0,
"structureComplete": 0,
"vulnerabilityRatio": 0,
"vulnerabilityRank": 0,
"htsFeasibility": 0,
"sbdFeasibility": 0,
"progressibility": 0,
"safety": 0
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
body | body | TargetImportDTO | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
Vote
POST /api/Vote/{id}
POST /api/Vote/{id}
Body parameter
{
"voteId": "fe9ca470-231f-4db6-a89a-539efac0ad92",
"voteButton": "string",
"comment": "string"
}
Parameters
Name | In | Type | Required | Description |
---|---|---|---|---|
id | path | string(uuid) | true | none |
body | body | RegisterVoteDTO | false | none |
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Vote/freeze
POST /api/elevated/Vote/freeze
Body parameter
[
"497f6eca-6276-4993-bfeb-53cbbbba6f08"
]
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
POST /api/elevated/Vote/enable
POST /api/elevated/Vote/enable
Body parameter
[
"497f6eca-6276-4993-bfeb-53cbbbba6f08"
]
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
VTarget
GET /api/data-view/VTarget/dash-view
GET /api/data-view/VTarget/dash-view
Responses
Status | Meaning | Description | Schema |
---|---|---|---|
200 | OK | Success | None |
Schemas
AppOrg
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"name": "string",
"alias": "string",
"address": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
name | string¦null | false | none | none |
alias | string¦null | false | none | none |
address | string¦null | false | none | none |
AppRole
{
"id": "string",
"name": "string",
"normalizedName": "string",
"concurrencyStamp": "string",
"description": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string¦null | false | none | none |
name | string¦null | false | none | none |
normalizedName | string¦null | false | none | none |
concurrencyStamp | string¦null | false | none | none |
description | string¦null | false | none | none |
BTask
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"status": "string",
"type": "string",
"dateCreated": "2019-08-24T14:15:22Z",
"dateCompleted": "2019-08-24T14:15:22Z"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
status | string¦null | false | none | none |
type | string¦null | false | none | none |
dateCreated | string(date-time) | false | none | none |
dateCompleted | string(date-time) | false | none | none |
Compound
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"externalCompoundIds": "string",
"smile": "string",
"molWeight": "string",
"molArea": "string",
"createdAt": "2019-08-24T14:15:22Z"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
strainId | string(uuid) | false | none | none |
externalCompoundIds | string¦null | false | none | none |
smile | string¦null | false | none | none |
molWeight | string¦null | false | none | none |
molArea | string¦null | false | none | none |
createdAt | string(date-time) | false | none | none |
CompoundEvolutionAddDTO
{
"smile": "string",
"molWeight": "string",
"molArea": "string",
"projectId": "5a8591dd-4039-49df-9202-96385ba3eff8",
"notes": "string",
"mic": 0,
"iC50": 0,
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
smile | string¦null | false | none | none |
molWeight | string¦null | false | none | none |
molArea | string¦null | false | none | none |
projectId | string(uuid) | false | none | none |
notes | string¦null | false | none | none |
mic | number(double) | false | none | none |
iC50 | number(double) | false | none | none |
createdAt | string(date-time) | false | none | none |
createdBy | string¦null | false | none | none |
Discussion
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"reference": "string",
"section": "string",
"topic": "string",
"description": "string",
"postedBy": "string",
"timestamp": "2019-08-24T14:15:22Z",
"mentions": [
"string"
],
"tags": [
"string"
],
"replies": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"discussionId": "9a94c521-c61a-42fa-ab06-09bac5ba5181",
"body": "string",
"postedBy": "string",
"timestamp": "2019-08-24T14:15:22Z",
"mentions": [
"string"
],
"tags": [
"string"
]
}
]
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
reference | string¦null | false | none | none |
section | string¦null | false | none | none |
topic | string¦null | false | none | none |
description | string¦null | false | none | none |
postedBy | string¦null | false | none | none |
timestamp | string(date-time) | false | none | none |
mentions | [string]¦null | false | none | none |
tags | [string]¦null | false | none | none |
replies | [Reply]¦null | false | none | none |
Gene
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"accessionNumber": "string",
"geneName": "string",
"function": "string",
"product": "string",
"functionalCategory": "string",
"geneExternalIds": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"externalIdRef": "string",
"externalId": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"genePublicData": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"type": "string",
"proteomics": "string",
"mutant": "string",
"comments": "string",
"start": "string",
"end": "string",
"orientation": "string",
"geneLength": "string",
"location": "string",
"geneSequence": "string",
"molecularMass": "string",
"isoelectricPoint": "string",
"proteinLength": "string",
"proteinSequence": "string",
"pfam": "string",
"m/Leprae": "string",
"m/Marinum": "string",
"m/Smegmatis": "string",
"cryo": "string",
"xRay": "string",
"model": "string",
"ligand": "string"
},
"geneEssentiality": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"classification": "string",
"condition": "string",
"strain": "string",
"method": "string",
"reference": "string",
"notes": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneProteinProduction": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"production": "string",
"method": "string",
"purity": "string",
"date": "2019-08-24T14:15:22Z",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneProteinActivityAssay": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"activity": "string",
"type": "string",
"throughput": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneCRISPRiStrain": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"crispRiStrain": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneResistanceMutation": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"mutation": "string",
"isolate": "string",
"parentStrain": "string",
"compound": "string",
"shiftInMIC": "string",
"org": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneVulnerability": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"rank": "string",
"uVi": "string",
"iVi": "string",
"viRatio": "string",
"vulnerabilityCondition": "string",
"operon": "string",
"confounded": "string",
"shell2015Operon": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneHypomorphs": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"knockdownStrain": "string",
"phenotype": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneUnpublishedStructures": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"organization": "string",
"method": "string",
"resolution": "string",
"ligands": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
]
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
strainId | string(uuid) | false | none | none |
accessionNumber | string¦null | false | none | none |
geneName | string¦null | false | none | none |
function | string¦null | false | none | none |
product | string¦null | false | none | none |
functionalCategory | string¦null | false | none | none |
geneExternalIds | [GeneExternalId]¦null | false | none | none |
GeneCRISPRiStrain
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"crispRiStrain": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
geneId | string(uuid) | false | none | none |
geneAccessionNumber | string¦null | false | none | none |
crispRiStrain | string¦null | false | none | none |
createdAt | string(date-time) | false | none | none |
createdBy | string¦null | false | none | none |
GeneEssentiality
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"classification": "string",
"condition": "string",
"strain": "string",
"method": "string",
"reference": "string",
"notes": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
geneId | string(uuid) | false | none | none |
geneAccessionNumber | string¦null | false | none | none |
classification | string¦null | false | none | none |
condition | string¦null | false | none | none |
strain | string¦null | false | none | none |
method | string¦null | false | none | none |
reference | string¦null | false | none | none |
notes | string¦null | false | none | none |
createdAt | string(date-time) | false | none | none |
createdBy | string¦null | false | none | none |
GeneExternalId
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"externalIdRef": "string",
"externalId": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
geneId | string(uuid) | false | none | none |
geneAccessionNumber | string¦null | false | none | none |
externalIdRef | string¦null | false | none | none |
externalId | string¦null | false | none | none |
createdAt | string(date-time) | false | none | none |
createdBy | string¦null | false | none | none |
GeneGroup
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"name": "string",
"type": "string",
"genes": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneGroupId": "ee44a9df-bc3d-455e-9532-c0c75cc025f5",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"accessionNumber": "string",
"gene": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"accessionNumber": "string",
"geneName": "string",
"function": "string",
"product": "string",
"functionalCategory": "string",
"geneExternalIds": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"externalIdRef": "string",
"externalId": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"genePublicData": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"type": "string",
"proteomics": "string",
"mutant": "string",
"comments": "string",
"start": "string",
"end": "string",
"orientation": "string",
"geneLength": "string",
"location": "string",
"geneSequence": "string",
"molecularMass": "string",
"isoelectricPoint": "string",
"proteinLength": "string",
"proteinSequence": "string",
"pfam": "string",
"m/Leprae": "string",
"m/Marinum": "string",
"m/Smegmatis": "string",
"cryo": "string",
"xRay": "string",
"model": "string",
"ligand": "string"
},
"geneEssentiality": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"classification": "string",
"condition": "string",
"strain": "string",
"method": "string",
"reference": "string",
"notes": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneProteinProduction": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"production": "string",
"method": "string",
"purity": "string",
"date": "2019-08-24T14:15:22Z",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneProteinActivityAssay": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"activity": "string",
"type": "string",
"throughput": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneCRISPRiStrain": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"crispRiStrain": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneResistanceMutation": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"mutation": "string",
"isolate": "string",
"parentStrain": "string",
"compound": "string",
"shiftInMIC": "string",
"org": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneVulnerability": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"rank": "string",
"uVi": "string",
"iVi": "string",
"viRatio": "string",
"vulnerabilityCondition": "string",
"operon": "string",
"confounded": "string",
"shell2015Operon": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneHypomorphs": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"knockdownStrain": "string",
"phenotype": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneUnpublishedStructures": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"organization": "string",
"method": "string",
"resolution": "string",
"ligands": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
]
},
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98"
}
]
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
strainId | string(uuid) | false | none | none |
name | string¦null | false | none | none |
type | string¦null | false | none | none |
genes | [GeneGroupGenes]¦null | false | none | none |
GeneGroupGenes
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneGroupId": "ee44a9df-bc3d-455e-9532-c0c75cc025f5",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"accessionNumber": "string",
"gene": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"accessionNumber": "string",
"geneName": "string",
"function": "string",
"product": "string",
"functionalCategory": "string",
"geneExternalIds": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"externalIdRef": "string",
"externalId": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"genePublicData": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"type": "string",
"proteomics": "string",
"mutant": "string",
"comments": "string",
"start": "string",
"end": "string",
"orientation": "string",
"geneLength": "string",
"location": "string",
"geneSequence": "string",
"molecularMass": "string",
"isoelectricPoint": "string",
"proteinLength": "string",
"proteinSequence": "string",
"pfam": "string",
"m/Leprae": "string",
"m/Marinum": "string",
"m/Smegmatis": "string",
"cryo": "string",
"xRay": "string",
"model": "string",
"ligand": "string"
},
"geneEssentiality": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"classification": "string",
"condition": "string",
"strain": "string",
"method": "string",
"reference": "string",
"notes": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneProteinProduction": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"production": "string",
"method": "string",
"purity": "string",
"date": "2019-08-24T14:15:22Z",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneProteinActivityAssay": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"activity": "string",
"type": "string",
"throughput": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneCRISPRiStrain": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"crispRiStrain": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneResistanceMutation": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"mutation": "string",
"isolate": "string",
"parentStrain": "string",
"compound": "string",
"shiftInMIC": "string",
"org": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneVulnerability": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"rank": "string",
"uVi": "string",
"iVi": "string",
"viRatio": "string",
"vulnerabilityCondition": "string",
"operon": "string",
"confounded": "string",
"shell2015Operon": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneHypomorphs": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"knockdownStrain": "string",
"phenotype": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneUnpublishedStructures": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"organization": "string",
"method": "string",
"resolution": "string",
"ligands": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
]
},
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
geneGroupId | string(uuid) | false | none | none |
geneId | string(uuid) | false | none | none |
accessionNumber | string¦null | false | none | none |
GeneHypomorph
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"knockdownStrain": "string",
"phenotype": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
geneId | string(uuid) | false | none | none |
geneAccessionNumber | string¦null | false | none | none |
knockdownStrain | string¦null | false | none | none |
phenotype | string¦null | false | none | none |
createdAt | string(date-time) | false | none | none |
createdBy | string¦null | false | none | none |
GenePromotionRequest
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"genePromtionRequestGenes": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"genePromotionRequestId": "ef12751d-8cf1-4196-aef2-f96d96d25b46",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9"
}
],
"targetName": "string",
"targetType": "string",
"genePromotionRequestStatus": "string",
"genePromotionRequestValues": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"genePromotionRequestId": "ef12751d-8cf1-4196-aef2-f96d96d25b46",
"question": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"identification": "string",
"module": "string",
"subModule": "string",
"questionBody": "string",
"notes": "string",
"toolTip": "string",
"possibleAnswers": [
"string"
]
},
"questionId": "ffa0420e-f70b-4e5b-99a0-434bff860467",
"answer": "string",
"description": "string",
"answerdBy": "string"
}
]
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
genePromtionRequestGenes | [GenePromtionRequestGene]¦null | false | none | none |
GenePromotionRequestValue
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"genePromotionRequestId": "ef12751d-8cf1-4196-aef2-f96d96d25b46",
"question": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"identification": "string",
"module": "string",
"subModule": "string",
"questionBody": "string",
"notes": "string",
"toolTip": "string",
"possibleAnswers": [
"string"
]
},
"questionId": "ffa0420e-f70b-4e5b-99a0-434bff860467",
"answer": "string",
"description": "string",
"answerdBy": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
genePromotionRequestId | string(uuid) | false | none | none |
GenePromtionRequestGene
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"genePromotionRequestId": "ef12751d-8cf1-4196-aef2-f96d96d25b46",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
genePromotionRequestId | string(uuid) | false | none | none |
geneId | string(uuid) | false | none | none |
GeneProteinActivityAssay
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"activity": "string",
"type": "string",
"throughput": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
geneId | string(uuid) | false | none | none |
geneAccessionNumber | string¦null | false | none | none |
activity | string¦null | false | none | none |
type | string¦null | false | none | none |
throughput | string¦null | false | none | none |
createdAt | string(date-time) | false | none | none |
createdBy | string¦null | false | none | none |
GeneProteinProduction
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"production": "string",
"method": "string",
"purity": "string",
"date": "2019-08-24T14:15:22Z",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
geneId | string(uuid) | false | none | none |
geneAccessionNumber | string¦null | false | none | none |
production | string¦null | false | none | none |
method | string¦null | false | none | none |
purity | string¦null | false | none | none |
date | string(date-time) | false | none | none |
createdAt | string(date-time) | false | none | none |
createdBy | string¦null | false | none | none |
GenePublicData
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"type": "string",
"proteomics": "string",
"mutant": "string",
"comments": "string",
"start": "string",
"end": "string",
"orientation": "string",
"geneLength": "string",
"location": "string",
"geneSequence": "string",
"molecularMass": "string",
"isoelectricPoint": "string",
"proteinLength": "string",
"proteinSequence": "string",
"pfam": "string",
"m/Leprae": "string",
"m/Marinum": "string",
"m/Smegmatis": "string",
"cryo": "string",
"xRay": "string",
"model": "string",
"ligand": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
geneId | string(uuid) | false | none | none |
geneAccessionNumber | string¦null | false | none | none |
type | string¦null | false | none | none |
proteomics | string¦null | false | none | none |
mutant | string¦null | false | none | none |
comments | string¦null | false | none | none |
start | string¦null | false | none | none |
end | string¦null | false | none | none |
orientation | string¦null | false | none | none |
geneLength | string¦null | false | none | none |
location | string¦null | false | none | none |
geneSequence | string¦null | false | none | none |
molecularMass | string¦null | false | none | none |
isoelectricPoint | string¦null | false | none | none |
proteinLength | string¦null | false | none | none |
proteinSequence | string¦null | false | none | none |
pfam | string¦null | false | none | none |
m/Leprae | string¦null | false | none | none |
m/Marinum | string¦null | false | none | none |
m/Smegmatis | string¦null | false | none | none |
cryo | string¦null | false | none | none |
xRay | string¦null | false | none | none |
model | string¦null | false | none | none |
ligand | string¦null | false | none | none |
GenePublicEditDTO
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"accessionNumber": "string",
"geneName": "string",
"function": "string",
"product": "string",
"functionalCategory": "string",
"genePublicData": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"type": "string",
"proteomics": "string",
"mutant": "string",
"comments": "string",
"start": "string",
"end": "string",
"orientation": "string",
"geneLength": "string",
"location": "string",
"geneSequence": "string",
"molecularMass": "string",
"isoelectricPoint": "string",
"proteinLength": "string",
"proteinSequence": "string",
"pfam": "string",
"m/Leprae": "string",
"m/Marinum": "string",
"m/Smegmatis": "string",
"cryo": "string",
"xRay": "string",
"model": "string",
"ligand": "string"
}
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
accessionNumber | string¦null | false | none | none |
geneName | string¦null | false | none | none |
function | string¦null | false | none | none |
product | string¦null | false | none | none |
functionalCategory | string¦null | false | none | none |
GeneResistanceMutation
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"mutation": "string",
"isolate": "string",
"parentStrain": "string",
"compound": "string",
"shiftInMIC": "string",
"org": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
geneId | string(uuid) | false | none | none |
geneAccessionNumber | string¦null | false | none | none |
mutation | string¦null | false | none | none |
isolate | string¦null | false | none | none |
parentStrain | string¦null | false | none | none |
compound | string¦null | false | none | none |
shiftInMIC | string¦null | false | none | none |
org | string¦null | false | none | none |
createdAt | string(date-time) | false | none | none |
createdBy | string¦null | false | none | none |
GeneUnpublishedStructures
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"organization": "string",
"method": "string",
"resolution": "string",
"ligands": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
geneId | string(uuid) | false | none | none |
geneAccessionNumber | string¦null | false | none | none |
organization | string¦null | false | none | none |
method | string¦null | false | none | none |
resolution | string¦null | false | none | none |
ligands | string¦null | false | none | none |
createdAt | string(date-time) | false | none | none |
createdBy | string¦null | false | none | none |
GeneVulnerability
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"rank": "string",
"uVi": "string",
"iVi": "string",
"viRatio": "string",
"vulnerabilityCondition": "string",
"operon": "string",
"confounded": "string",
"shell2015Operon": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
geneId | string(uuid) | false | none | none |
geneAccessionNumber | string¦null | false | none | none |
rank | string¦null | false | none | none |
uVi | string¦null | false | none | none |
iVi | string¦null | false | none | none |
viRatio | string¦null | false | none | none |
vulnerabilityCondition | string¦null | false | none | none |
operon | string¦null | false | none | none |
confounded | string¦null | false | none | none |
shell2015Operon | string¦null | false | none | none |
createdAt | string(date-time) | false | none | none |
createdBy | string¦null | false | none | none |
H2LDTO
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"h2LStart": "2019-08-24T14:15:22Z",
"h2LDescription": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
h2LStart | string(date-time) | false | none | none |
h2LDescription | string¦null | false | none | none |
Header
{
"items": [
{}
]
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
items | [HeaderItem]¦null | false | read-only | none |
HeaderItem
{}
Properties
None
Hit
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"screenId": "0a3dc761-8e38-4c8a-ab93-391c2eb0c3c1",
"targetName": "string",
"library": "string",
"source": "string",
"method": "string",
"mic": 0,
"micCondition": "string",
"iC50": 0,
"clusterGroup": 0,
"compoundId": "7bd121cb-f376-4a53-aaa0-99a4ed392648",
"compound": {
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"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"externalCompoundIds": "string",
"smile": "string",
"molWeight": "string",
"molArea": "string",
"createdAt": "2019-08-24T14:15:22Z"
},
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string",
"voteId": "fe9ca470-231f-4db6-a89a-539efac0ad92",
"vote": {
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"elementId": "7d5101f9-b2fe-42c1-88fa-7ad5ef49633e",
"positive": 0,
"neutral": 0,
"negative": 0,
"isVotingAllowed": true,
"lastModified": "2019-08-24T14:15:22Z",
"voters": [
{
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"voteId": "fe9ca470-231f-4db6-a89a-539efac0ad92",
"voterEmail": "string",
"votedPositive": true,
"votedNeutral": true,
"votedNegative": true,
"votedOn": "2019-08-24T14:15:22Z",
"comment": "string"
}
],
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
screenId | string(uuid) | false | none | none |
targetName | string¦null | false | none | none |
library | string¦null | false | none | none |
source | string¦null | false | none | none |
method | string¦null | false | none | none |
mic | number(double) | false | none | none |
micCondition | string¦null | false | none | none |
iC50 | number(double) | false | none | none |
clusterGroup | integer(int32) | false | none | none |
compoundId | string(uuid) | false | none | none |
HitCSVDTO
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"screenId": "0a3dc761-8e38-4c8a-ab93-391c2eb0c3c1",
"externalCompoundIds": "string",
"targetName": "string",
"library": "string",
"source": "string",
"method": "string",
"mic": 0,
"micCondition": "string",
"iC50": 0,
"clusterGroup": "string",
"smile": "string",
"molWeight": "string",
"molArea": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
screenId | string(uuid) | false | none | none |
externalCompoundIds | string¦null | false | none | none |
targetName | string¦null | false | none | none |
library | string¦null | false | none | none |
source | string¦null | false | none | none |
method | string¦null | false | none | none |
mic | number(double) | false | none | none |
micCondition | string¦null | false | none | none |
iC50 | number(double) | false | none | none |
clusterGroup | string¦null | false | none | none |
smile | string¦null | false | none | none |
molWeight | string¦null | false | none | none |
molArea | string¦null | false | none | none |
IActualSequence
{
"characters": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
characters | string¦null | false | read-only | none |
INDDTO
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"indStart": "2019-08-24T14:15:22Z",
"indDescription": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
indStart | string(date-time) | false | none | none |
indDescription | string¦null | false | none | none |
LODTO
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"loStart": "2019-08-24T14:15:22Z",
"loDescription": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
loStart | string(date-time) | false | none | none |
loDescription | string¦null | false | none | none |
P1DTO
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"p1Start": "2019-08-24T14:15:22Z",
"p1Description": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
p1Start | string(date-time) | false | none | none |
p1Description | string¦null | false | none | none |
ProjectCreateDTO
{
"projectName": "string",
"screenId": "0a3dc761-8e38-4c8a-ab93-391c2eb0c3c1",
"baseHits": [
{
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"targetName": "string",
"library": "string",
"source": "string",
"method": "string",
"mic": 0,
"micCondition": "string",
"iC50": 0,
"clusterGroup": 0,
"compoundId": "7bd121cb-f376-4a53-aaa0-99a4ed392648",
"compound": {
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"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"externalCompoundIds": "string",
"smile": "string",
"molWeight": "string",
"molArea": "string",
"createdAt": "2019-08-24T14:15:22Z"
},
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string",
"voteId": "fe9ca470-231f-4db6-a89a-539efac0ad92",
"vote": {
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"lastModified": "2019-08-24T14:15:22Z",
"voters": [
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"voterEmail": "string",
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"votedNegative": true,
"votedOn": "2019-08-24T14:15:22Z",
"comment": "string"
}
],
"createdAt": "2019-08-24T14:15:22Z",
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}
}
],
"representationStructure": {
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"createdAt": "2019-08-24T14:15:22Z"
},
"primaryOrg": {
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"name": "string",
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"address": "string"
},
"supportingOrgs": [
{
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"address": "string"
}
],
"fhaStart": "2019-08-24T14:15:22Z",
"fhaDescription": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
projectName | string¦null | false | none | none |
screenId | string(uuid) | false | none | none |
baseHits | [Hit]¦null | false | none | none |
ProjectEditDTO
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"priority": "string",
"priorityDescription": "string",
"probability": "string",
"probabilityDescription": "string",
"teamPriority": "string",
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"teamProbability": "string",
"teamProbabilityDescription": "string",
"fhaStart": "2019-08-24T14:15:22Z",
"fhaPredictedStart": "2019-08-24T14:15:22Z",
"fhaDescription": "string",
"h2LStart": "2019-08-24T14:15:22Z",
"h2LPredictedStart": "2019-08-24T14:15:22Z",
"h2LDescription": "string",
"loStart": "2019-08-24T14:15:22Z",
"loPredictedStart": "2019-08-24T14:15:22Z",
"loDescription": "string",
"spStart": "2019-08-24T14:15:22Z",
"spPredictedStart": "2019-08-24T14:15:22Z",
"spDescription": "string",
"pcdDate": "2019-08-24T14:15:22Z",
"pcdDescription": "string",
"indStart": "2019-08-24T14:15:22Z",
"indPredictedStart": "2019-08-24T14:15:22Z",
"indDescription": "string",
"clinicalP1Start": "2019-08-24T14:15:22Z",
"clinicalP1PredictedStart": "2019-08-24T14:15:22Z",
"clinicalP1Description": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
priority | string¦null | false | none | none |
priorityDescription | string¦null | false | none | none |
probability | string¦null | false | none | none |
probabilityDescription | string¦null | false | none | none |
teamPriority | string¦null | false | none | none |
teamPriorityDescription | string¦null | false | none | none |
teamProbability | string¦null | false | none | none |
teamProbabilityDescription | string¦null | false | none | none |
fhaStart | string(date-time) | false | none | none |
fhaPredictedStart | string(date-time) | false | none | none |
fhaDescription | string¦null | false | none | none |
h2LStart | string(date-time) | false | none | none |
h2LPredictedStart | string(date-time) | false | none | none |
h2LDescription | string¦null | false | none | none |
loStart | string(date-time) | false | none | none |
loPredictedStart | string(date-time) | false | none | none |
loDescription | string¦null | false | none | none |
spStart | string(date-time) | false | none | none |
spPredictedStart | string(date-time) | false | none | none |
spDescription | string¦null | false | none | none |
pcdDate | string(date-time) | false | none | none |
pcdDescription | string¦null | false | none | none |
indStart | string(date-time) | false | none | none |
indPredictedStart | string(date-time) | false | none | none |
indDescription | string¦null | false | none | none |
clinicalP1Start | string(date-time) | false | none | none |
clinicalP1PredictedStart | string(date-time) | false | none | none |
clinicalP1Description | string¦null | false | none | none |
ProjectPriorityProbabilityDTO
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"teamPriority": "string",
"teamPriorityDescription": "string",
"teamProbability": "string",
"teamProbabilityDescription": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
teamPriority | string¦null | false | none | none |
teamPriorityDescription | string¦null | false | none | none |
teamProbability | string¦null | false | none | none |
teamProbabilityDescription | string¦null | false | none | none |
ProjectTerminateDTO
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"projectName": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
projectName | string¦null | false | none | none |
Question
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"identification": "string",
"module": "string",
"subModule": "string",
"questionBody": "string",
"notes": "string",
"toolTip": "string",
"possibleAnswers": [
"string"
]
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
identification | string¦null | false | none | none |
module | string¦null | false | none | none |
subModule | string¦null | false | none | none |
questionBody | string¦null | false | none | none |
notes | string¦null | false | none | none |
toolTip | string¦null | false | none | none |
possibleAnswers | [string]¦null | false | none | none |
RegisterDto
{
"email": "user@example.com",
"displayName": "string",
"orgId": "25b2c2d5-a7fc-47d0-89e4-8709a1560bfa",
"bio": "string",
"roles": [
"string"
],
"lock": true
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
string(email) | true | none | none | |
displayName | string | true | none | none |
orgId | string(uuid) | true | none | none |
bio | string¦null | false | none | none |
roles | [string] | true | none | none |
lock | boolean | false | none | none |
RegisterVoteDTO
{
"voteId": "fe9ca470-231f-4db6-a89a-539efac0ad92",
"voteButton": "string",
"comment": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
voteId | string(uuid) | false | none | none |
voteButton | string¦null | false | none | none |
comment | string¦null | false | none | none |
Reply
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"discussionId": "9a94c521-c61a-42fa-ab06-09bac5ba5181",
"body": "string",
"postedBy": "string",
"timestamp": "2019-08-24T14:15:22Z",
"mentions": [
"string"
],
"tags": [
"string"
]
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
discussionId | string(uuid) | false | none | none |
body | string¦null | false | none | none |
postedBy | string¦null | false | none | none |
timestamp | string(date-time) | false | none | none |
mentions | [string]¦null | false | none | none |
tags | [string]¦null | false | none | none |
SPDTO
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"spStart": "2019-08-24T14:15:22Z",
"spDescription": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
spStart | string(date-time) | false | none | none |
spDescription | string¦null | false | none | none |
Screen
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"baseTarget": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"name": "string",
"type": "string",
"targetGenes": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"targetId": "cbca1126-180e-4334-9df8-cf82289d378b",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"accessionNumber": "string",
"gene": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"accessionNumber": "string",
"geneName": "string",
"function": "string",
"product": "string",
"functionalCategory": "string",
"geneExternalIds": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"externalIdRef": "string",
"externalId": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"genePublicData": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"type": "string",
"proteomics": "string",
"mutant": "string",
"comments": "string",
"start": "string",
"end": "string",
"orientation": "string",
"geneLength": "string",
"location": "string",
"geneSequence": "string",
"molecularMass": "string",
"isoelectricPoint": "string",
"proteinLength": "string",
"proteinSequence": "string",
"pfam": "string",
"m/Leprae": "string",
"m/Marinum": "string",
"m/Smegmatis": "string",
"cryo": "string",
"xRay": "string",
"model": "string",
"ligand": "string"
},
"geneEssentiality": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"classification": "string",
"condition": "string",
"strain": "string",
"method": "string",
"reference": "string",
"notes": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneProteinProduction": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"production": "string",
"method": "string",
"purity": "string",
"date": "2019-08-24T14:15:22Z",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneProteinActivityAssay": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"activity": "string",
"type": "string",
"throughput": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneCRISPRiStrain": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"crispRiStrain": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneResistanceMutation": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"mutation": "string",
"isolate": "string",
"parentStrain": "string",
"compound": "string",
"shiftInMIC": "string",
"org": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneVulnerability": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"rank": "string",
"uVi": "string",
"iVi": "string",
"viRatio": "string",
"vulnerabilityCondition": "string",
"operon": "string",
"confounded": "string",
"shell2015Operon": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneHypomorphs": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"knockdownStrain": "string",
"phenotype": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneUnpublishedStructures": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"organization": "string",
"method": "string",
"resolution": "string",
"ligands": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
]
},
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98"
}
],
"bucket": "string",
"impactScore": 0,
"impactComplete": 0,
"likeScore": 0,
"likeComplete": 0,
"screeningScore": 0,
"screeningComplete": 0,
"structureScore": 0,
"structureComplete": 0,
"vulnerabilityRatio": 0,
"vulnerabilityRank": 0,
"htsFeasibility": 0,
"sbdFeasibility": 0,
"progressibility": 0,
"safety": 0,
"targetScorecard": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"targetID": "cbb7866b-27ff-4bfe-b93a-e06c7aea73b6",
"targetName": "string",
"targetScoreCardValues": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"targetScorecardId": "b77ee3ac-0dd1-477f-8ec3-dc97fdae7d31",
"targetName": "string",
"question": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"identification": "string",
"module": "string",
"subModule": "string",
"questionBody": "string",
"notes": "string",
"toolTip": "string",
"possibleAnswers": [
"string"
]
},
"questionId": "ffa0420e-f70b-4e5b-99a0-434bff860467",
"questionIdentification": "string",
"questionModule": "string",
"questionSubModule": "string",
"answer": "string",
"description": "string",
"answerdBy": "string"
}
],
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
},
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string",
"background": "string",
"enablement": "string",
"strategy": "string",
"challenges": "string"
},
"targetId": "cbca1126-180e-4334-9df8-cf82289d378b",
"screenName": "string",
"screenType": "string",
"method": "string",
"targetName": "string",
"geneName": "string",
"status": "string",
"org": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"name": "string",
"alias": "string",
"address": "string"
},
"orgId": "25b2c2d5-a7fc-47d0-89e4-8709a1560bfa",
"promotionDate": "2019-08-24T14:15:22Z",
"promoter": "string",
"screenSequences": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"screenId": "0a3dc761-8e38-4c8a-ab93-391c2eb0c3c1",
"targetName": "string",
"method": "string",
"protocol": "string",
"library": "string",
"scientist": "string",
"startDate": "2019-08-24T14:15:22Z",
"endDate": "2019-08-24T14:15:22Z",
"unverifiedHitCount": 0,
"noOfCompoundsScreened": 0,
"concentration": 0,
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"validatedHits": [
{
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"targetName": "string",
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"source": "string",
"method": "string",
"mic": 0,
"micCondition": "string",
"iC50": 0,
"clusterGroup": 0,
"compoundId": "7bd121cb-f376-4a53-aaa0-99a4ed392648",
"compound": {
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"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"externalCompoundIds": "string",
"smile": "string",
"molWeight": "string",
"molArea": "string",
"createdAt": "2019-08-24T14:15:22Z"
},
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string",
"voteId": "fe9ca470-231f-4db6-a89a-539efac0ad92",
"vote": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"elementId": "7d5101f9-b2fe-42c1-88fa-7ad5ef49633e",
"positive": 0,
"neutral": 0,
"negative": 0,
"isVotingAllowed": true,
"lastModified": "2019-08-24T14:15:22Z",
"voters": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"voteId": "fe9ca470-231f-4db6-a89a-539efac0ad92",
"voterEmail": "string",
"votedPositive": true,
"votedNeutral": true,
"votedNegative": true,
"votedOn": "2019-08-24T14:15:22Z",
"comment": "string"
}
],
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
}
],
"notes": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
strainId | string(uuid) | false | none | none |
ScreenSequence
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"screenId": "0a3dc761-8e38-4c8a-ab93-391c2eb0c3c1",
"targetName": "string",
"method": "string",
"protocol": "string",
"library": "string",
"scientist": "string",
"startDate": "2019-08-24T14:15:22Z",
"endDate": "2019-08-24T14:15:22Z",
"unverifiedHitCount": 0,
"noOfCompoundsScreened": 0,
"concentration": 0,
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
screenId | string(uuid) | false | none | none |
targetName | string¦null | false | none | none |
method | string¦null | false | none | none |
protocol | string¦null | false | none | none |
library | string¦null | false | none | none |
scientist | string¦null | false | none | none |
startDate | string(date-time) | false | none | none |
endDate | string(date-time)¦null | false | none | none |
unverifiedHitCount | integer(int32) | false | none | none |
noOfCompoundsScreened | integer(int32) | false | none | none |
concentration | number(float) | false | none | none |
createdAt | string(date-time) | false | none | none |
createdBy | string¦null | false | none | none |
Sequence
{
"header": {
"items": [
{}
]
},
"data": {
"characters": "string"
}
}
Properties
None
Target
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"name": "string",
"type": "string",
"targetGenes": [
{
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"targetId": "cbca1126-180e-4334-9df8-cf82289d378b",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"accessionNumber": "string",
"gene": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"strainId": "c68d9ccb-3cae-4d38-a081-a863f8e0ff98",
"accessionNumber": "string",
"geneName": "string",
"function": "string",
"product": "string",
"functionalCategory": "string",
"geneExternalIds": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"externalIdRef": "string",
"externalId": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"genePublicData": {
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"type": "string",
"proteomics": "string",
"mutant": "string",
"comments": "string",
"start": "string",
"end": "string",
"orientation": "string",
"geneLength": "string",
"location": "string",
"geneSequence": "string",
"molecularMass": "string",
"isoelectricPoint": "string",
"proteinLength": "string",
"proteinSequence": "string",
"pfam": "string",
"m/Leprae": "string",
"m/Marinum": "string",
"m/Smegmatis": "string",
"cryo": "string",
"xRay": "string",
"model": "string",
"ligand": "string"
},
"geneEssentiality": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"classification": "string",
"condition": "string",
"strain": "string",
"method": "string",
"reference": "string",
"notes": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneProteinProduction": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"production": "string",
"method": "string",
"purity": "string",
"date": "2019-08-24T14:15:22Z",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneProteinActivityAssay": [
{
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"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"activity": "string",
"type": "string",
"throughput": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneCRISPRiStrain": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"crispRiStrain": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneResistanceMutation": [
{
"id": "497f6eca-6276-4993-bfeb-53cbbbba6f08",
"geneId": "856784b5-c022-4da7-b7db-8943699c39a9",
"geneAccessionNumber": "string",
"mutation": "string",
"isolate": "string",
"parentStrain": "string",
"compound": "string",
"shiftInMIC": "string",
"org": "string",
"createdAt": "2019-08-24T14:15:22Z",
"createdBy": "string"
}
],
"geneVulnerability": [
{
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Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
strainId | string(uuid) | false | none | none |
name | string¦null | false | none | none |
type | string¦null | false | none | none |
targetGenes | [TargetGene]¦null | false | none | none |
TargetGene
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],
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],
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],
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Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
targetId | string(uuid) | false | none | none |
geneId | string(uuid) | false | none | none |
accessionNumber | string¦null | false | none | none |
TargetImportDTO
{
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}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
genePromtionRequestGenes | [GenePromtionRequestGene]¦null | false | none | none |
TargetScoreCardValue
{
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}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
targetScorecardId | string(uuid) | false | none | none |
targetName | string¦null | false | none | none |
TargetScorecard
{
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],
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Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
targetID | string(uuid) | false | none | none |
targetName | string¦null | false | none | none |
targetScoreCardValues | [TargetScoreCardValue]¦null | false | none | none |
TargetSummaryDTO
{
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}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
background | string¦null | false | none | none |
enablement | string¦null | false | none | none |
strategy | string¦null | false | none | none |
challenges | string¦null | false | none | none |
UnlinkedProjectCreateDTO
{
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},
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],
"fhaStart": "2019-08-24T14:15:22Z",
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"mic": 0,
"iC50": 0
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
projectName | string¦null | false | none | none |
UserDto
{
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"email": "string",
"roles": [
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],
"bio": "string",
"org": {
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},
"lock": true,
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}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string¦null | false | none | none |
displayName | string¦null | false | none | none |
string | true | none | none | |
roles | [string]¦null | false | none | none |
bio | string¦null | false | none | none |
Vote
{
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"voters": [
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}
],
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}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
elementId | string(uuid) | false | none | none |
positive | integer(int32) | false | none | none |
neutral | integer(int32) | false | none | none |
negative | integer(int32) | false | none | none |
isVotingAllowed | boolean | false | none | none |
lastModified | string(date-time) | false | none | none |
voters | [Voter]¦null | false | none | none |
Voter
{
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"comment": "string"
}
Properties
Name | Type | Required | Restrictions | Description |
---|---|---|---|---|
id | string(uuid) | false | none | none |
voteId | string(uuid) | false | none | none |
voterEmail | string¦null | false | none | none |
votedPositive | boolean | false | none | none |
votedNeutral | boolean | false | none | none |
votedNegative | boolean | false | none | none |
votedOn | string(date-time) | false | none | none |
comment | string¦null | false | none | none |